CDS

Accession Number TCMCG006C95587
gbkey CDS
Protein Id XP_013673965.2
Location complement(join(42159875..42159925,42160076..42160204,42160287..42160390,42160455..42160539,42160609..42160679,42160810..42160865,42160967..42161092,42161459..42161589,42161686..42161821,42161908..42162026,42162199..42162289,42162395..42162534,42162602..42162679,42162890..42162934,42163017..42163148,42163240..42163320,42163412..42163516,42163916..42163996,42164080..42164196,42164315..42164431,42164540..42164650,42164743..42164853,42165190..42165282,42165380..42165439,42165774..42165872,42165954..42166004,42166161..42166193,42166513..42166572,42166886..42166996,42167082..42167187,42167308..42167372,42167636..42167688,42167760..42167850,42167937..42168009,42168084..42168176,42168323..42168444,42168533..42168629,42168709..42168734))
Gene LOC106378370
GeneID 106378370
Organism Brassica napus

Protein

Length 1149aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013818511.2
Definition DNA-directed RNA polymerase III subunit 2-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category K
Description DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
KEGG_TC -
KEGG_Module M00181        [VIEW IN KEGG]
KEGG_Reaction R00435        [VIEW IN KEGG]
R00441        [VIEW IN KEGG]
R00442        [VIEW IN KEGG]
R00443        [VIEW IN KEGG]
KEGG_rclass RC02795        [VIEW IN KEGG]
BRITE br01611        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K03021        [VIEW IN KEGG]
EC 2.7.7.6        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00230        [VIEW IN KEGG]
ko00240        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko03020        [VIEW IN KEGG]
ko04623        [VIEW IN KEGG]
ko05169        [VIEW IN KEGG]
map00230        [VIEW IN KEGG]
map00240        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map03020        [VIEW IN KEGG]
map04623        [VIEW IN KEGG]
map05169        [VIEW IN KEGG]
GOs GO:0000428        [VIEW IN EMBL-EBI]
GO:0001817        [VIEW IN EMBL-EBI]
GO:0001819        [VIEW IN EMBL-EBI]
GO:0002682        [VIEW IN EMBL-EBI]
GO:0002684        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003899        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005666        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006383        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009553        [VIEW IN EMBL-EBI]
GO:0009561        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016779        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031347        [VIEW IN EMBL-EBI]
GO:0031349        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032479        [VIEW IN EMBL-EBI]
GO:0032481        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032648        [VIEW IN EMBL-EBI]
GO:0032728        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034062        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045088        [VIEW IN EMBL-EBI]
GO:0045089        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050776        [VIEW IN EMBL-EBI]
GO:0050778        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051240        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:0097747        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTACTCGATCACGAAGACTTAGACTTGATGAACGATGACAACTTTGTCGACAAGAAGAAGCTTTCAGCTCCTATCAAGTCTACAGCAGATAAGTTTCAACTCGTCCCAGAGTTTCTCAAGGTGAGAGGACTTGTGAAGCAACACCTTGATTCATTCAATTACTTCATCAATGTCGGGATCAAGAAGATTGCTCGTGCGAATTCTCGTATTACGTCCACTCTCGACCCTTCCATTTACCTATGGTTTAAGGATGTCTATGTTGGTGAACCCTCTATTTTAAATGTTGGTACGGCGGAAGTAATCAATCCACACATGTGCCGACTAGCTGACATGACGTATGCTGCTCCGATATATGTCAACATAGAATATGTTCATGGAATTCATGGAAAGACGACGATAAGTGCAAAGGATAAGGTTGTTATCGGAAGGATGCCTATTATGTTGAGGAGTTGCCGCTGTGTATTACACGGAAAAGATGAAGAGGAACTTGCAAGATTGGGTGAGTGCCCACTTGATCCTGGAGGATATTTTGTCATCAAAGGAACCGAGAAGGTGTTGTTGATACAAGAACAACTTTCTAAGAATAGGATTATTATTGATTCTGATAAAAAAGGGAACATAAATGCATCTGTCACAAGCAGCAGTGAAACAACGAAAAGCAAAACAGTTATTCAGATGGAGAAGGAGAAGATATATTTGTATCTACATCAATTTGTAAAAAAGATTCCAATAATAATCGTCCTAAAAGCTATGGGAATGGAGAGCGACCAAGAGATCGTACAGATGGTTGGAAGGGATCCCCGTTTTAGTGCATCACTTCTACCTTCTATGGAGGAGTGTATTAGTGAAGGTGTGAATACACGACAACAAGCACTGGACTATCTTGAAGCAAAGGTGAAGAGATCATCGTATGGACCACCTGAAAAGGATGGCCGAGCTCTATACATTCTGAGAGAATTATTCCTTGCACATGTACCTGTGCGTGATGACAATTATCGCCAAAAATGTTTCTATGTTGGGGTGATGTTGAGAAGAATGATTGAAGCAATGTTGAACAAAGATTCCATGGATGACAAGGACTATGTTGGTAACAAGCGGTTGGAGTTGTCTGGACAACTAATATCTCTTCTCTTTGAGGATTTGTTCAAAACGATGACCACCGATACCATTAAAAAAGTAGATGCTATCCTTCAAAAACTTAACCAGGCAACCCGATTCGATTTTTCTCAATGTCTCACTGGAGAAAAGAATCATAATATTTCTTTTGGATTAGAAAGAACTCTTTCCACGGGAAACTTTGACATTAAAAGGTTCAGAATGCAAAGGAAAGGCATGACACAGGTCTTGACAAGGTTATCTTTCATTGGGAGCTTGGGGTCTATTACGAAAATTTCGCCACAGTTTGAAAAGTCCAGAAAAGTTAGTGGGCCTAGATCTTTGCAACCCAGCCAGTGGGGCATGCTCTGCCCATGTGATACCCCTGAAGGAGAATCTTGTGGGCTTGTCAAGAATTTGGCTTTAATGACTCATGTCACAACGGATCAAGAGGAAGGTCCATTGGTTGCTATGTGCTTCAAATTGGGTGTTACAGATCTGGAAGTATTGTCAGCAGAGGAGCTGCATACTCCAGACTCGTTTTTGGTCATATTTAATGGGCTAATACTTGGCAAACATAGAAGGCCACAGTACTTCGCCAATTCACTTAGAAGGCTGCGTAGAGCTGGGAAAATTGGCGAATTCGTCAGTGTATTCATAAACGAAAAGCAGCATTGTGTTTACGTTGCTTCTGATGGTGGGCGGGTGTGTCGTCCACTTGTTATAGTAGAGAATGGAGAATCAAGAGTTAAACAACACCACATGAAAGAACTAAAGGATGGTGTTCGCACTTTTGATGACTTCATTCGTGAAGGTTTGATCGAGTATCTTGATGTTAATGAGGAAAATAATGCGCTGATTGCTTTATACGAAAGTGAAGCCATGAAAGACGTAACCCACATTGAGATTGAGCCTTTCACCATCTTAGGTGTTGTTGCTGGTCTTATCCCCTACCCTCACCATAATCAGTCGCCTAGAAATACTTACCAGTGCGCTATGGGAAAACAAGCGATGGGAAATATTGCTTACAACCAGTTAAACCGGATGGACTCTTTGCTTTACCTATTGGTGTATCCTCAACGACCCCTGTTGACAACGAGAACAATTGAATTGGTTGGATACGATAAACTTGGAGCAGGTCAAAATGCAACAGTTGCTGTGATGAGTAATACTGGGTACGATATTGAGGATGCAATTGTGATGAACAAAGCTTCCTTAGATCGTGGTTTTGAACGCTGCATTGTTAAGAAAACAGTTGTTGCTACTTGCCAGAAGTATGGTAACGATACAGTGGACAGAATACTAAGGCCAGAAAGAACAGGTCCAGATGCTGAAAAGATGCAGATACTGGATGATGATGGAATCGCTGCTCCAGGGGAAATTATTAGACCGAATGATGTGTATATAAATAAACAAATCCCTGTTGACACCAGAGATAACATGACATCTCCGCCATCAGACACTCAATATCGTCCGGCCAGAGAGTATTTTAAAGGTCCTGAAGGGGAGACACAAGTGGTCGAAAGAGTTGCTCTCTGTTCTCACAAGAACGGTAATTTATGCATAAAGTATAACATCCGACATACTCGTCGACCAGAGCTTGGAGACAAGTTCAGCAGTAGGCATGGGCAGAAAGGTGTTTGTGGTACAATCGTTCAGCAAGAAGATTTTCCATTTTCTGAACGTGGAATTTGCCCTGATTTGATCATGAATCCTCATGGGTTTCCAAGTCGTATGACAGTAGGTAAGATGATGGAACTTCTTGGAAGTAAAGCTGGGGTGTCTTCTGGTAGATTTCATTATGGTAGTGCTTTTGGAGAAGAAAGTGGTCATGCTGACACGGTTGAAAATATAAGTAAGACCCTTGTGAAGCATCGCTATTCCTACTGTGGGAAGGAGTTGTTATACTCAGGTCTCAGTGGCGAGCCATTGCAAACATACGTCTTTATGGGGCCAATATATTACCAGAAACTGAAACACATGGTCATGGACAAAATGCATGCGCGAGGGAGTGGACAGCGTGTGATGATGACAAGACAGCCAACTGAAGGGAAATCTAAAAATGGAGGTTTACGAGTGGGAGAAATGGAACGAGATTGTCTTATTGCTTATGGAGCCAGCATGTTGATCTATGAGCGTCTCATGCTCTCTAGTGATCCTTTTGAAGTTCAGGTTTGCAGAGCTTGCGGTTTATTGGGATATTACGATTACAAGCTGAAGAAGGCAGTTTGTTCAACTTGTAAAAATGGTGATAGCATTGCTACTTTGAAACTCCCTTACGCATGCAAGCTCCTTTTCCAGGAACTGCAGTCGATGAATGTTGTTCCGCGTCTTGTTCTAAGGGAAATGTAG
Protein:  
MVLDHEDLDLMNDDNFVDKKKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYFINVGIKKIARANSRITSTLDPSIYLWFKDVYVGEPSILNVGTAEVINPHMCRLADMTYAAPIYVNIEYVHGIHGKTTISAKDKVVIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFVIKGTEKVLLIQEQLSKNRIIIDSDKKGNINASVTSSSETTKSKTVIQMEKEKIYLYLHQFVKKIPIIIVLKAMGMESDQEIVQMVGRDPRFSASLLPSMEECISEGVNTRQQALDYLEAKVKRSSYGPPEKDGRALYILRELFLAHVPVRDDNYRQKCFYVGVMLRRMIEAMLNKDSMDDKDYVGNKRLELSGQLISLLFEDLFKTMTTDTIKKVDAILQKLNQATRFDFSQCLTGEKNHNISFGLERTLSTGNFDIKRFRMQRKGMTQVLTRLSFIGSLGSITKISPQFEKSRKVSGPRSLQPSQWGMLCPCDTPEGESCGLVKNLALMTHVTTDQEEGPLVAMCFKLGVTDLEVLSAEELHTPDSFLVIFNGLILGKHRRPQYFANSLRRLRRAGKIGEFVSVFINEKQHCVYVASDGGRVCRPLVIVENGESRVKQHHMKELKDGVRTFDDFIREGLIEYLDVNEENNALIALYESEAMKDVTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSNTGYDIEDAIVMNKASLDRGFERCIVKKTVVATCQKYGNDTVDRILRPERTGPDAEKMQILDDDGIAAPGEIIRPNDVYINKQIPVDTRDNMTSPPSDTQYRPAREYFKGPEGETQVVERVALCSHKNGNLCIKYNIRHTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMMELLGSKAGVSSGRFHYGSAFGEESGHADTVENISKTLVKHRYSYCGKELLYSGLSGEPLQTYVFMGPIYYQKLKHMVMDKMHARGSGQRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASMLIYERLMLSSDPFEVQVCRACGLLGYYDYKLKKAVCSTCKNGDSIATLKLPYACKLLFQELQSMNVVPRLVLREM